CSMET specifications

Information


Unique identifier OMICS_25806
Name CSMET
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Source code URL http://www.sailing.cs.cmu.edu/main/csmet/software/csmet.zip
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Eric Xing

Publication for CSMET

CSMET citation

library_books

Dynamic changes in methylome and transcriptome patterns in response to methyltransferase inhibitor 5 azacytidine treatment in citrus

2017
PMCID: 5737679
PMID: 28575160
DOI: 10.1093/dnares/dsx021

[…] The gene expression of the citrus DNA methyltransferase genes CsMET1, CsCMT1 and CsDRM1; the DNA demethylase gene CsDME1; and the chromatin-remodeling gene CsDDM1, was investigated in response to 5azaC treatment. As shown in , CsMET1, CsCMT1 and CsDDM1 were sign […]

CSMET institution(s)
School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA
CSMET funding source(s)
Supported by an NSF CAREER Award under grant No. DBI-0546594.

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