CTK specifications


Unique identifier OMICS_13317
Name CTK
Alternative names CLIP Tool Kit, CIMS (Crosslinking Induced Mutation Sites)
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input data FASTQ
Output format SAM
Operating system Unix/Linux, Mac OS, Windows
Programming languages Perl
Computer skills Advanced
Version 1.0.7
Stability Stable
Maintained Yes



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  • person_outline Chaolin Zhang <>

Publications for CLIP Tool Kit

CTK institution(s)
Department of Systems Biology, Department of Biochemistry and Molecular Biophysics, Center for Motor Neuron Biology and Disease, Columbia University, New York, NY, USA
CTK funding source(s)
This work was supported by grants from the National Institutes of Health (NIH) (R00GM95713 and R01NS89676) and the Simons Foundation Autism Research Initiative (307711).

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