CTree protocols

CTree specifications

Information


Unique identifier OMICS_04816
Name CTree
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Stability Stable
Maintained Yes

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Publication for CTree

CTree IN pipeline

2017
PMCID: 5214804
PMID: 28070453
DOI: 10.7717/peerj.2733

[…] model allowing for a gamma-distributed rate variation among sites with 500 bootstrap replicates. these maximum likelihood trees were subsequently used to automatically detect clusters with the ctree heuristic cluster finding algorithm using the most sensitive parameters (archer & robertson, 2007). this method takes into account the overall genetic diversity of a gene segment […]

CTree institution(s)
Faculty of Life Science, University of Manchester, Michael Smith Building, Oxford Road, Manchester, UK

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