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Information


Unique identifier OMICS_04816
Name CTree
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Stability Stable
Maintained Yes

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Publication for CTree

CTree citations

 (55)
library_books

A broad atlas of somatic hypermutation allows prediction of activation induced deaminase targets

2018
PMCID: 5839764
PMID: 29374026
DOI: 10.1084/jem.20171738

[…] The conditional inference tree for classification was built using the ctree function from the party R package with default parameters. Genes with a background mutation frequency >5 × 10−4 were excluded to avoid artifacts. The following variables were fed into the model […]

library_books

Estimating population extinction thresholds with categorical classification trees for Louisiana black bears

2018
PLoS One
PMCID: 5779663
PMID: 29360863
DOI: 10.1371/journal.pone.0191435

[…] e-specific numeric scales where N and λ could range from 0 to ∞ and φ could range from 0 to 1.We used the same training data sets and explanatory variables as our variable importance analysis and the ctree function in the R package party [] to grow separate classification trees for each set of predictor variables for the TRB and UARB. We converted the EXTANT variable from the variable importance d […]

library_books

Predictive modeling of emergency cesarean delivery

2018
PLoS One
PMCID: 5779661
PMID: 29360875
DOI: 10.1371/journal.pone.0191248

[…] ke information criterion (AIC). Their DA was assessed through their areas under the receiver-operating-characteristic (ROC) curves (AUCs) along with their 95% CI.We then fitted a classification tree (CTREE or conditionally unbiased inference classification tree), a relatively new and useful predictive technique for studying RFs and outcomes based on the unbiased recursive splitting of the study po […]

library_books

Determination of size, sex and maturity stage of free swimming catsharks using laser photogrammetry

2017
PMCID: 5651705
PMID: 29104316
DOI: 10.1007/s00227-017-3241-7

[…] he RF models characterised by a good prediction performance and enabled to identify the range of the morphometric ratios values associated with each sex and/or maturity stage of male and female. The ‘ctree’ function for conditional inference trees in the ‘party’ R package (Hothorn et al. ) was used. Live fish (males) were then used to test if the trade-off values of the morphometric ratios identif […]

library_books

Decision trees in epidemiological research

2017
PMCID: 5607590
PMID: 28943885
DOI: 10.1186/s12982-017-0064-4

[…] In both CART and CTree, splitting continues until a stopping rule triggers. In CART, splitting stops when the relative reduction in error resulting from the best split falls below a pre-specified threshold known as th […]

call_split

Hunting of roe deer and wild boar in Germany: Is non lead ammunition suitable for hunting?

2017
PLoS One
PMCID: 5605046
PMID: 28926620
DOI: 10.1371/journal.pone.0185029
call_split See protocol

[…] ees []. Conditional inference trees recursively perform univariate splits [] of the dependent variable based on values of different covariates. Conditional inference trees were constructed using the “ctree” function from the R package Party version 1.0–21 [] with statistics software R version 3.3.1. These non-parametric regression trees can be used for nominal, ordinal, numerical, censored and mul […]

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CTree institution(s)
Faculty of Life Science, University of Manchester, Michael Smith Building, Oxford Road, Manchester, UK

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