curatedOvarianData specifications

Information


Unique identifier OMICS_05815
Name curatedOvarianData
Restrictions to use None
Version 1.18.0
Requirements
R(>=2.10.0), BiocGenerics, BiocStyle, affy, RUnit, genefilter, survival, xtable, sva, futile.logger, metafor, logging
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Publication for curatedOvarianData

curatedOvarianData citation

library_books

Leveraging global gene expression patterns to predict expression of unmeasured genes

2015
BMC Genomics
PMCID: 4678722
PMID: 26666289
DOI: 10.1186/s12864-015-2250-5

[…] orrelation and binary matrices as well as the expression scaling and prediction model creation and testing was performed using R 3.0.1 []. The following R packages were used throughout our work-flow: curatedOvarianData [], randomForest [], boot [], igraph [], doppelgangR (https://github.com/lwaldron/doppelgangR), and ggplot2 []. GGS was implemented using Python 2.7 (using docopt, numpy, itertools, […]

curatedOvarianData institution(s)
Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA, USA

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