CyanoEXpress specifications


Unique identifier OMICS_11958
Name CyanoEXpress
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Version 2.2
Maintained Yes


  • person_outline Matthias E. Futschik

Publication for CyanoEXpress

CyanoEXpress citations


Toward a systems level understanding of gene regulatory, protein interaction, and metabolic networks in cyanobacteria

Front Genet
PMCID: 4079066
PMID: 25071821
DOI: 10.3389/fgene.2014.00191

[…] ataset currently contains more than 700 microarray measurements, and is regularly updated with newly available data. These expression profiles were clustered and made available to researchers through CyanoEXpress (, a web-based user-friendly visualization tool, for exploration of expression profiles (Hernandez-Prieto and Futschik, ). Gene-directed search enables r […]


CyanoEXpress: A web database for exploration and visualisation of the integrated transcriptome of cyanobacterium Synechocystis sp. PCC6803

PMCID: 3400984
PMID: 22829745
DOI: 10.6026/97320630008634

[…] Cyanobase []. The clustered expression matrices can be visualized and queried through a Common Gateway Interface (CGI)-based application, which is a modified version of the GeneXplorer software []. CyanoEXpress is currently running on an Apache web server under an Ubuntu Linux operating system.Expression data for all genes, but only for perturbations of environmental conditions, excluding data f […]

CyanoEXpress institution(s)
Systems Biology and Bioinformatics Laboratory, Centre of Marine Sciences, University of Algarve, Faro, Portugal; ARC Centre of Excellence for Translational Photosynthesis and School of Biological Sciences, University of Sydney, Australia
CyanoEXpress funding source(s)
The presented work is supported by national Portuguese funding through FCT—Fundação para a Ciência e a Tecnologia, project ref. PTDC/BIA-MIC/101036/2008, IF/00881/2013 and PTDC/BIA-MIC/4418/2012 granted.

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