Cyscore statistics

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Cyscore specifications


Unique identifier OMICS_03704
Name Cyscore
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


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Publication for Cyscore

Cyscore in publications

PMCID: 5871981
PMID: 29538331
DOI: 10.3390/biom8010012

[…] classical sfs. in fact, this has also been shown to be the case for other classical sfs, which also became more predictive after they were modified in this way (e.g., autodock vina [] or cyscore []). it is also worth mentioning that rf is not the only machine-learning algorithm that leads to strongly outperforming x-score and other classical sfs, e.g., this is also the case […]

PMCID: 5831789
PMID: 29666662
DOI: 10.1155/2018/6565241

[…] results, we can conclude that gpcr motifs are more efficient features than amino acid frequencies in prediction of binding., we compared the prediction performance of the proposed approach with cyscore []. since cyscore requires 3d structure of the receptors, we generated gpcr with known 3d structure from pdb ( [] and their interacting ligand pairs of which number […]

PMCID: 4290609
PMID: 25521548
DOI: 10.1186/1471-2164-15-S9-S2

[…] (additional file ) shows the binding of chembl1242565 and chembl514348 to tinagl1 (additional file for template ligand binding to tinagl1)., binding affinity of ligands to tinagl1 was evaluated by cyscore [] (table ). all template ligands had negative, thus better, cyscores. although chembl1242746 or chembl1242747 did not achieve a negative cyscore, chembl1242747 had a low positive cyscore […]

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Cyscore institution(s)
Center for Growth, Metabolism and Aging, Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China

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