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CyteSeer specifications

Information


Unique identifier OMICS_10252
Name CyteSeer
Software type Application/Script
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Unix/Linux, Mac OS, Windows
License Commercial
Computer skills Medium
Version 2.0
Stability Stable
Maintained Yes

Versioning


No version available

Documentation


Additional information


http://valasciences-trac.sourcerepo.com/valasciences_CyteSeer

CyteSeer citations

 (7)
library_books

An Automated Platform for Assessment of Congenital and Drug Induced Arrhythmia with hiPSC Derived Cardiomyocytes

2017
Front Physiol
PMCID: 5641590
PMID: 29075196
DOI: 10.3389/fphys.2017.00766

[…] An R-script (R version 3.3.1) was developed that reads the CSV files generated by Cyteseer and amalgamates all the physiological parameters of interest into a single file. Using this dataset, we performed a meta-analysis of all experiments and determined the intra and inter thaw va […]

library_books

Inhibition of miR 25 Improves Cardiac Contractility in the Failing Heart

2014
Nature
PMCID: 4131725
PMID: 24670661
DOI: 10.1038/nature13073

[…] acquisition using the nuclear channel. All image capture was performed with a 20x 0.50 numerical aperture (NA) objective. Cytometric calcium kinetic parameters were determined by image analysis using CyteSeer software (Vala Sciences) and unresponsive or low responding cells were removed by gating. […]

library_books

Differential Phosphorylation of Perilipin 1A at the Initiation of Lipolysis Revealed by Novel Monoclonal Antibodies and High Content Analysis

2013
PLoS One
PMCID: 3566132
PMID: 23405163
DOI: 10.1371/journal.pone.0055511

[…] CyteSeer® (Vala Sciences Inc) is a Java-based PC/Mac/Linux- compatible cell image analysis program designed specifically for high content analysis. CyteSeer®’s Colocalization Algorithm has been specif […]

library_books

Bisphenol A Mediated Suppression of LPL Gene Expression Inhibits Triglyceride Accumulation during Adipogenic Differentiation of Human Adult Stem Cells

2012
PLoS One
PMCID: 3360737
PMID: 22662114
DOI: 10.1371/journal.pone.0036109

[…] During image acquisition, the same field of view was imaged in 2 separate optical channels to selectively visualize nuclei and lipid droplets. Images were merged and analyzed using Cyteseer image cytometry software (Valascience). A lipid droplet algorithm was employed to enable cell-by-cell analysis. Differentiation was quantified based on 2 parameters, namely triglyceride accum […]

library_books

Non Inflammatory Boronate Based Glucose Responsive Insulin Delivery Systems

2012
PLoS One
PMCID: 3260138
PMID: 22272238
DOI: 10.1371/journal.pone.0029585

[…] were treated with DAPI for 1 min and kept at 4°C until further analysis. Images of the cells were acquired with a Beckman-Coulter IC 100 automated high-throughput microscope system and analyzed using Cyteseer software (Vala Sciences, San Diego, CA) , . The co-localization of NF-κB was quantified by measuring the Pearson's correlation coefficient (PCC) between the nuclear and cytoplasmic fraction o […]

library_books

Dietary constituents reduce lipid accumulation in murine C3H10 T1/2 adipocytes: A novel fluorescent method to quantify fat droplets

2011
PMCID: 3117678
PMID: 21569430
DOI: 10.1186/1743-7075-8-30

[…] d Oil Red O procedure, delivering fast, multi-parametric and objective data in a labour-reduced manner. Its use is comparable with the system presented by McDonough and co-workers [], who applied the CyteSeer® image analysis software (Vala Sciences), together with a robotic microscopy instrument. However, the convenient use of commercially available cell culture plates, the easily applicable lipid […]


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CyteSeer institution(s)
Vala Sciences Inc, CA, USA

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