CyteSeer specifications


Unique identifier OMICS_10252
Name CyteSeer
Software type Application/Script
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Unix/Linux, Mac OS, Windows
License Commercial
Computer skills Medium
Version 2.0
Stability Stable
Maintained Yes


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CyteSeer in publications

PMCID: 5641590
PMID: 29075196
DOI: 10.3389/fphys.2017.00766

[…] produced by a novel differentiation protocol (cunningham et al., ; and supplementary figure )., the image analysis and physiological parameter calculation was conducted using commercially available cyteseer (vala sciences) as previously described (cerignoli et al., ; lu et al., ). briefly, the image output by cyteseer scanner were loaded into cyteseer and the whole well cardiac time series […]

PMCID: 4131725
PMID: 24670661
DOI: 10.1038/nature13073

[…] mir. at 48 h after transfection cells were fixed in 4% paraformaldehyde and imaging was performed using an automated fluorescent microscope (incell analyzer 1000; ge healthcare) and analyzed using cyteseer software (vala sciences) by quantifying total integrated pixel intensity within an egfp-positive area, as described,. hits were confirmed by a 5-point dose response assay (50nm to 3.125nm), […]

PMCID: 3566132
PMID: 23405163
DOI: 10.1371/journal.pone.0055511

[…] µm), and 622 (42 µm) were used for image acquisitions in the green, red, and far-red fluorescence channels, respectively. 20×0.8 na m27 plan apochromat and 63×1.4 na m27 dic objectives were used., cyteseer® (vala sciences inc) is a java-based pc/mac/linux- compatible cell image analysis program designed specifically for high content analysis. cyteseer®’s colocalization algorithm […]

PMCID: 3360737
PMID: 22662114
DOI: 10.1371/journal.pone.0036109

[…] software., during image acquisition, the same field of view was imaged in 2 separate optical channels to selectively visualize nuclei and lipid droplets. images were merged and analyzed using cyteseer image cytometry software (valascience). a lipid droplet algorithm was employed to enable cell-by-cell analysis. differentiation was quantified based on 2 parameters, namely triglyceride […]

PMCID: 3260138
PMID: 22272238
DOI: 10.1371/journal.pone.0029585

[…] treated with dapi for 1 min and kept at 4°c until further analysis. images of the cells were acquired with a beckman-coulter ic 100 automated high-throughput microscope system and analyzed using cyteseer software (vala sciences, san diego, ca) , . the co-localization of nf-κb was quantified by measuring the pearson's correlation coefficient (pcc) between the nuclear and cytoplasmic fraction […]

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CyteSeer institution(s)
Vala Sciences Inc, CA, USA

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