Flow cytometry and mass cytometry software tools

Multiparametric fluorescence and mass cytometry offers new perspectives to disclose and to monitor the high diversity of cell populations in the peripheral blood for biomarker research. While high-end cytometric devices are currently available to…

Flow cytometry & mass cytometry applications

Flow cytometry and mass cytometry software tools

Most Recent Tools

G T A T C G C T A
Wishbone
Desktop

Wishbone

Aligns single cells from differentiation systems with bifurcating branches.…

Aligns single cells from differentiation systems with bifurcating branches. Wishbone pinpoints bifurcation points and labels each cell as pre-bifurcation or as one of two post-bifurcation cell fates…

CATALYST
Desktop

CATALYST Cytometry dATa anALYSis Tools

Provides tools for pre-processing and analysis of cytometry data, including…

Provides tools for pre-processing and analysis of cytometry data, including compensation and in particular, an improved implementation of the single-cell deconvolution algorithm. CATALYST is a…

cydar
Desktop

cydar

Identifies differentially abundant populations between samples and groups in…

Identifies differentially abundant populations between samples and groups in mass cytometry data. Cydar is an R package that provides methods for counting cells into hyperspheres, controlling the…

ACDC
Desktop

ACDC Automated Cell-type Discovery and Classification

Automates the classification of canonical cell populations and highlights novel…

Automates the classification of canonical cell populations and highlights novel cell types in mass cytometry data. ACDC provides accurate and reliable estimations compared to manual gating results.…

Most Popular Tools

Citrus
Desktop

Citrus

A package for identifying clusters of cells in multidimensional flow cytometry…

A package for identifying clusters of cells in multidimensional flow cytometry data associated with an experimental or clinical endpoint of interest. A Citrus analysis generally involves four steps:…

CYTO U
Dataset

CYTO U CYTO University

An international, on-line resource for flow and image cytometry.

An international, on-line resource for flow and image cytometry.

Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.