Flow cytometry and mass cytometry software tools

Multiparametric fluorescence and mass cytometry offers new perspectives to disclose and to monitor the high diversity of cell populations in the peripheral blood for biomarker research. While high-end cytometric devices are currently available to…

Flow cytometry & mass cytometry applications

Most recent bioinformatics tools

one-dimensional…
Desktop

one-dimensional Soli-Expression by Nonlinear Stochastic Embedding

Facilitates the dimensional reduction method based on the t-distributed…

Facilitates the dimensional reduction method based on the t-distributed stochastic neighbor embedding (t-SNE) algorithm. oneSENSE is a graphical user interface (GUI) for categorical analysis of mass…

SANJAY
Algorithm

SANJAY

Synthesizes low-dimensional visualizations of flow cytometry data. SANJAY is an…

Synthesizes low-dimensional visualizations of flow cytometry data. SANJAY is an algorithmic approach for automatically synthesizing 2D and 3D visualizations of high-dimensional flow cytometry data.…

flowTime
Desktop

flowTime

Allows the analysis of dynamic and steady state experiments. flowTime…

Allows the analysis of dynamic and steady state experiments. flowTime simplifies the annotation of flow cytometry data with experimental metadata. It includes several functions for gate sets to…

MetaCyto
Desktop

MetaCyto

Enables automated meta-analysis of cytometry datasets, including both…

Enables automated meta-analysis of cytometry datasets, including both conventional flow and mass cytometry (CyTOF) data. MetaCyto combines clustering methods and a silhouette scanning method. The…

Most popular analytical software

Citrus
Desktop

Citrus

A package for identifying clusters of cells in multidimensional flow cytometry…

A package for identifying clusters of cells in multidimensional flow cytometry data associated with an experimental or clinical endpoint of interest. A Citrus analysis generally involves four steps:…

CYTO U
Dataset

CYTO U CYTO University

Provides a set of multi-module courses on flow, image cytometry and shared…

Provides a set of multi-module courses on flow, image cytometry and shared resource laboratory technologies and applications. CYTO U is the International Society for Advancement of Cytometry…

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