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Cytoscape Web | An interactive web-based network browser


Allows network visualization. Cytoscape Web can be customized and incorporated into any web site. It allows the client application to define a network of nodes and edges and customize their attributes. The tool permits to dynamically change node and edge visual styles, using any of the following methods: specifying default visual properties for all elements; mapping node and edge attributes to visual styles; and overriding default or mapped styles by setting a bypass style.

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Cytoscape Web classification

Cytoscape Web specifications

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Command line interface
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Unix/Linux, Mac OS, Windows
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Software type:
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Programming languages:

Cytoscape Web distribution


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Cytoscape Web support



  • Gary Bader <>

Additional information

Tuto:; This project has been replaced by Cytoscape.js, and is no longer active.


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Banting and Best Department of Medical Research, Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada

Funding source(s)

Supported by Genome Canada through the Ontario Genomics Institute (grant number 2007-OGI-TD-05); the U.S. National Institute of General Medical Sciences of the National Institutes of Health (grant number 2R01GM070743-06).

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.