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Cytoscape Web

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Allows network visualization. Cytoscape Web can be customized and incorporated into any web site. It allows the client application to define a network of nodes and edges and customize their attributes. The tool permits to dynamically change node and edge visual styles, using any of the following methods: specifying default visual properties for all elements; mapping node and edge attributes to visual styles; and overriding default or mapped styles by setting a bypass style.

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Cytoscape Web versioning

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Cytoscape Web classification

Cytoscape Web specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Javascript
Version:
1.0.4
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

Cytoscape Web support

Documentation

Maintainer

  • Gary Bader <>

Additional information

Tuto: http://cytoscapeweb.cytoscape.org/tutorial; This project has been replaced by Cytoscape.js, and is no longer active.

Credits

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Publications

Institution(s)

Banting and Best Department of Medical Research, Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, ON, Canada

Funding source(s)

Supported by Genome Canada through the Ontario Genomics Institute (grant number 2007-OGI-TD-05); the U.S. National Institute of General Medical Sciences of the National Institutes of Health (grant number 2R01GM070743-06).

Link to literature

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