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CytoSpec specifications

Information


Unique identifier OMICS_27202
Name CytoSpec
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Medium
Version 9
Stability Stable
Maintained Yes

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CytoSpec in publications

 (26)
PMCID: 5951363
PMID: 29597312
DOI: 10.3390/ma11040517

[…] 4.1, renishaw, uk). for the baseline correction, the inbuilt automatic intelligent background removal was used. after these initial steps, the data was further processed in the matlab based software cytospec (version 2.00.01). regions of interest (roi) from the secondary cell wall and the cell corner area of each measured mapping were extracted and averages were calculated. all cell wall average […]

PMCID: 5876598
PMID: 29629368
DOI: 10.3389/fchem.2018.00028

[…] integration time of 0.15 s in the spectral region between 1050 and 2650 cm−1. wire 4.1 software (renishaw) was used for measurement setup and spectral pretreatment. data analysis was performed using cytospec (version 2.00.01), a commercially available matlab based software. for intensity profile line scans, the spectra were baseline corrected and the particles fluorescence relative intensities […]

PMCID: 5874596
PMID: 29370089
DOI: 10.3390/plants7010007

[…] each spectrum was frequency calibrated using the spectrum of toluene, and spikes were removed using matlab (the mathworks, inc., natick, ma, usa). all spectra and raman maps were analysed using cytospec (cytospec, berlin, germany), and origin (originlab, northampton, ma, usa) software. color scale bars for chemical images from the raman data range from blue (low signal) to red (high […]

PMCID: 5763141
PMID: 29445403
DOI: 10.1155/2017/4585169

[…] coadded. all spectral acquisition and control functions of the microscope were performed through bruker opus version 6.5., spectra from all liver samples were extracted using the cytospectm (cytospec inc., boston ma, usa) spectroscopic software after performing a quality test to assess the appropriate sample thickness, rejecting the spectra with maximum absorbance less than 0.2 […]

PMCID: 5734741
PMID: 29253012
DOI: 10.1371/journal.pone.0188345

[…] 7.2 software suite (bruker), to remove the presence of atmospheric water vapour and carbon dioxide from the spectra. the spectra embedded in each corrected spectral map were then pre-processed using cytospec v. 1.4.02 (cytospec inc., boston, ma, usa) software, using noise reduction and 2nd derivatization with 13-point savitzky-golay algorithms [], in order to eliminate the broad baseline offset […]


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