CytoSure Interpret Software statistics

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Citations per year

Number of citations per year for the bioinformatics software tool CytoSure Interpret Software
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Protocols

CytoSure Interpret Software specifications

Information


Unique identifier OMICS_00718
Name CytoSure Interpret Software
Software type Package/Module
Interface Command line interface
Restrictions to use License purchase required
Operating system Unix/Linux
License Commercial
Computer skills Advanced
Stability Stable
Maintained Yes

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CytoSure Interpret Software citations

 (23)
call_split

16p11.2 microdeletion syndrome: a case report

2018
PMCID: 5881179
PMID: 29609622
DOI: 10.1186/s13256-018-1587-1
call_split See protocol

[…] lution of 3 μm. Data were extracted from the microarray image, the background subtracted, and then normalized using feature extraction software Mapix 8.1.1. These data were subsequently imported into CytoSure Interpret Software v. 4.8 (OGT-020022). The genomic copy number was defined by the analysis of the normalized log2 (Cy5/Cy3) ratio average of the CGH signal. The moving average was computed u […]

library_books

Evaluation of the ISL1 gene in the pathogenesis of bladder exstrophy in a Swedish cohort

2018
Hum Genome Var
PMCID: 5874392
PMID: 29619236
DOI: 10.1038/hgv.2018.9

[…] was scanned on a microarray scanner with 3 mm resolution, and initial data analysis was performed with the Feature Extraction software v 11.5.1.1 (Agilent Technologies), followed by analysis with the CytoSure Interpret Software (Oxford Gene Technology). […]

library_books

Two novel colorectal cancer risk loci in the region on chromosome 9q22.32

2018
Oncotarget
PMCID: 5834248
PMID: 29541405
DOI: 10.18632/oncotarget.24340

[…] were calculated by dividing the normalized intensity in the sample by the mean intensity across the reference sample. The log2 ratios were plotted and segmented by circular binary segmentation in the CytoSure Interpret software (Oxford Gene Technology, Oxfordshire, UK). Oligonucleotide probe positions were annotated to the human genome assembly hg19 (www.genome.ucsc.edu). […]

call_split

The 11q Gain/Loss Aberration Occurs Recurrently in MYC Negative Burkitt like Lymphoma With 11q Aberration, as Well as MYC Positive Burkitt Lymphoma and MYC Positive High Grade B Cell Lymphoma, NOS

2017
PMCID: 5848380
PMID: 29272887
DOI: 10.1093/ajcp/aqx139
call_split See protocol

[…] Array analysis was performed as described. Briefly, CytoSure Interpret software, version 020022 (OGT), was used for analysis of array data. Deletion or duplication calls were made using the log2 ratio of each segment that has a minimum of four probes. […]

library_books

PHIP a novel candidate breast cancer susceptibility locus on 6q14.1

2017
Oncotarget
PMCID: 5732689
PMID: 29262523
DOI: 10.18632/oncotarget.21800

[…] were calculated by dividing the normalized intensity in the sample by the mean intensity across the reference sample. The log2 ratios were plotted and segmented by circular binary segmentation in the CytoSure Interpret software (Oxford Gene Technology, Oxfordshire, UK). Oligonucleotide probe positions were annotated to Human Genome Assembly hg19. […]

library_books

Molecular and clinical characterization of new patient with 1,08 Mb deletion in 10p15.3 region

2017
PMCID: 5588601
PMID: 28912834
DOI: 10.1186/s13039-017-0336-2

[…] r washing the array was analyzed with the Agilent scanner and Feature Extraction software (Agilent Technologies, Santa Clara, CA) and text file outputs from the quantization analysis were imported to CytoSure Interpret Software (Oxford Gene Technology) for copy number analysis.FISH analyses of the 10p15.3 region was performed according to a standard protocol, using BAC clone RP11–62O22. Briefly, a […]


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