CytoSVM statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Cytokine prediction chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

CytoSVM specifications

Information


Unique identifier OMICS_20620
Name CytoSVM
Interface Web user interface
Restrictions to use None
Input data The protein primary sequence of putative receptor/cytokine.
Input format FASTA
Output data The list of cytokines/receptors which are able to interact with query sequence with certain probabilities.
Computer skills Basic
Stability No
Maintained Yes

Maintainers


  • person_outline Zhi-Liang Ji <>
  • person_outline Zhi-Liang Ji <>

Publication for CytoSVM

CytoSVM in publication

PMCID: 2773837
PMID: 19800234
DOI: 10.1016/j.cub.2009.08.056

[…] membrane proteins; hmmtop-, which predicts transmembrane helices within the sequence (where the presence of three or more transmembrane helices are predicted to belong to the inner membrane); cytosvm-, the gram-negative version of the support vector machine trained to identify cytoplasmic proteins; and the final prediction. we also used the tmhmm program to identify transmembrane helices […]


To access a full list of publications, you will need to upgrade to our premium service.

CytoSVM institution(s)
Key Laboratory for Cell Biology & Tumor Cell Engineering, the Ministry of Education of China, School of Life Sciences, Xiamen University, Xiamen, China; The Key Laboratory for Chemical Biology of Fujian Province, Xiamen University, Xiamen, China
CytoSVM funding source(s)
Supported by the National Natural Science Foundation of China (#30400573) and the Program for New Century Excellent Talents in University (NCET) of MOE and Xiamen University.

CytoSVM reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review CytoSVM