Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 11
Release date: Oct 14 2009
Last update date: Apr 5 2017
Access: Public
Diseases: Breast Neoplasms
Dataset link Expression Profiling of a Mouse Xenograft Model of “Triple-Negative” Breast Cancer Brain Metastases With Vorinostat

Experimental Protocol


We performed gene expression profiling on metastases from vehicle- or vorinostat-treated mice to determine if alterations in gene expression were observable that were consistent with the phenotypes observed. Brain metastases from five vehicle-treated mice and six 150 mg/kg vorinostat-treated mice were procured by laser capture microdissection. RNA was extracted from the captured tumor cells from each brain and two rounds of linear amplification was done. The amplified RNA from each mouse was processed separately through microarray hybridization and analysis.

Repositories


GEO

GSE18544

ArrayExpress

E-GEOD-18544

BioProject

PRJNA121351

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Contact


Sean Davis