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D3.js specifications


Unique identifier OMICS_05540
Name D3.js
Software type Framework/Library, Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Javascript
License BSD 3-clause “New” or “Revised” License
Computer skills Medium
Version 4.9.1
Stability Stable
Source code URL https://codeload.github.com/d3/d3/tar.gz/v4.9.1
Maintained Yes
Wikipedia https://github.com/d3/d3/wiki




No version available


  • person_outline Michael Bostock

D3.js citations


ResearchMaps.org for integrating and planning research

PLoS One
PMCID: 5933701
PMID: 29723213
DOI: 10.1371/journal.pone.0195271

[…] Node.js (https://nodejs.org/) is the runtime environment responsible for client requests. The HTML is supplemented by the Bootstrap framework (http://getbootstrap.com/) for standard components, while D3.js [] is used to modify the visualized graphs, which are created as SVG files using Graphviz []. Scripting is handled by JavaScript, often accompanied by the jQuery library (https://jquery.com/). W […]


KAMO: towards automated data processing for microcrystals

Acta Crystallogr D Struct Biol
PMCID: 5930351
PMID: 29717715
DOI: 10.1107/S2059798318004576

[…] all number (for example one) should be given if radiation damage is severe.The summary and details of clustering and merging results are reported in an HTML file with visualization using amCharts and D3.js (Supplementary Fig. S1). […]


An integrated clinical and genomic information system for cancer precision medicine

BMC Med Genomics
PMCID: 5918454
PMID: 29697362
DOI: 10.1186/s12920-018-0347-9

[…] ne.Project home page: system(s): Platform independent.Programming language: JavaScript.Other requirements: Node.js version 4.4.7 or higher, MySQL version 5.6 or higher, D3.js, igv.js.License: Proprietary (allowed for non-commercial use only).Any restrictions to use by non-academics: restricted by the license. […]


Towards a new approach to reveal dynamical organization of the brain using topological data analysis

Nat Commun
PMCID: 5895632
PMID: 29643350
DOI: 10.1038/s41467-018-03664-4

[…] as also developed to interact with the shape graph (Supplementary Fig. ). This implementation was developed using HTML5, Scalable Vector Graphics (SVG), CSS, and JavaScript. Specifically, we used the D3.js framework (Data-driven documentation; D3) for displaying individual participants’ shape graphs and the associated spatial profiles (generated from the mixture modeling at each time frame). The i […]


iDREM: Interactive visualization of dynamic regulatory networks

PLoS Comput Biol
PMCID: 5868853
PMID: 29538379
DOI: 10.1371/journal.pcbi.1006019

[…] iDREM is implemented using a combination of Java and Javascript. The regulatory model prediction part is implemented in Java and the interactive visualization is implemented in Javascript with D3.js and Google charts. Users only need to run the main java program idrem.jar to get all results including the interactive visualization. Please refer to iDREM readme for more details (https://githu […]


A hierarchical anatomical classification schema for prediction of phenotypic side effects

PLoS One
PMCID: 5832387
PMID: 29494708
DOI: 10.1371/journal.pone.0193959

[…] ffects across different organs, sub-systems as well as systems is presented in . Detailed structure of hierarchical anatomical coarse-graining schema is provided in . A dynamic webpage implemented in D3.js illustrating the anatomical classification is available at http://cosylab.iiitd.edu.in/ADRhac.html.Side effects that were too ambiguous to be linked to any particular organ were moved to the mis […]


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