Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 40
Release date: Nov 19 2018
Last update date: Nov 29 2018
Access: Public
Diseases: Deficiency Diseases, Neoplasms, Germ Cell and Embryonal, Parkinsonian Disorders
Chemicals: Zinc
Genes: SLC39A7, Tgfb3
Taxon: Homo sapiens, Mus musculus
Dataset link Human immunodeficiency reveals the Zn2+-dependence of B cell development

Experimental Protocol


We constructed 40 RNA-seq libraries; 4 stages of B cells, 2 conditions (WT and mutant), 5 replicates. 5 WT and 5 P198A/P198A mutant staight chimeras mice were stained and sorted for FrB,C,D,E in BM. 100 cells each sample, processed by Smartseq2. Sequenced by HiSeq4000.

Repositories


GEO

GSE108178

ENA

SRP126928

BioProject

PRJNA422757

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Contact


Adam Cribbs