Computational protocol: Streptococcus suis sortase A is Ca2+ independent and is inhibited by acteoside, isoquercitrin and baicalin

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Protocol publication

[…] The signal peptide was predicted by SignalP 3.0 []. Multiple protein sequences were aligned using ClustalW [], and further processed with the ESPript programs []. Protein structure homology modeling was performed using the SWISS-MODEL Workspace (http://swissmodel.expasy.org/). Structural alignment, analysis and graph preparation were performed with PyMOL []. […]

Pipeline specifications

Software tools SignalP, Clustal W, SWISS-MODEL, PyMOL
Databases ExPASy
Application Protein structure analysis
Organisms Streptococcus suis, Staphylococcus aureus, Epipremnum aureum