Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 9
Release date: Aug 9 2016
Last update date: Oct 10 2018
Access: Public
Diseases: Arterial Occlusive Diseases
Computational protocol: TopHat, Cufflinks, DAVID, UCSC Genome Browser, KEGG PATHWAY
Dataset link Suppression of ischemia in arterial occlusive disease by JNK-promoted native collateral artery development

Experimental Protocol


RNA-seq analysis of mouse lung endothelial cells (MLEC) of the following genotypes Cdh5-Cre+ Jnk1+/+ Jnk2+/+ Jnk3-/-(ECtrl), Cdh5-Cre- Jnk1LoxP/LoxP Jnk2LoxP/LoxP Jnk3-/- (EfCtrl), and Cdh5-Cre+ Jnk1LoxP/LoxP Jnk2LoxP/LoxP Jnk3-/- (E3KO). Three separate samples from mouse lung endothelial cells of each genotype were analyzed.

Repositories


GEO

GSE71159

ArrayExpress

E-GEOD-71159

ENA

SRP061376

BioProject

PRJNA290473

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Contact


Kasmir Ramo

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