Dataset features

Specifications


Dataset type: Expression profiling by array
Number of samples: 4
Release date: Feb 5 2019
Last update date: Feb 5 2019
Access: Public
Dataset link Transcriptomic analysis of KDM4B-mediated genes in AGS cells

Experimental Protocol


KDM4B control and knockdown cell lines were established in AGS cells based on the lentivirus system: pLKO (control) and shKDM4B (shRNA-specific RNA) lines. Global expression analysis was performed in AGS cells (pLKO vs. KDM4B-knockdown) uninfected or infected by H. pylori at an moi of 50 for 6 h. Microarray analysis was conducted by the National Health Research Institutes, using Affymetrix GeneChip Human Gene 2.0 ST Array (Affymetrix, Santa Clara, California, USA).

Repositories


GEO

GSE107703

BioProject

PRJNA421157

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Contact


Meng-Chen Wu