Dataset features

Specifications


Application: DNA methylation array analysis
Number of samples: 4
Release date: Jan 15 2016
Last update date: Jul 25 2018
Access: Public
Diseases: Sleep Initiation and Maintenance Disorders, Neoplasms, Tumor Lysis Syndrome, Seminoma
Dataset link Genome-wide methylation analysis and gene expression profiling identifies genes silenced in non-seminoma cell lines [methylation]

Experimental Protocol


Genomic DNA and RNA was extracted from cell lines representing four subtypes of GCT. RNA was subjected to Affymetric expression array analysis while DNA was bisulfite treated and analysed using Illumina Infinium 450K arrays. Statistical approaches were used to correlate methylation and expression for each gene.

Repositories


GEO

GSE65027

ArrayExpress

E-GEOD-65027

BioProject

PRJNA272734

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