Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 16
Release date: Jun 20 2014
Last update date: Mar 31 2015
Access: Public
Chemicals: Heme, Iron, Oxygen, Steroids
Dataset link Gene expression in natural subyearling fall Chinook salmon in the Snake and Clearwater Rivers

Experimental Protocol


Non-migrating and migrating natural subyearling fall Chinook salmon were collected from the Snake River. Non-migrating natural subyearling fall Chinook salmon were collected from the Clearwater River. Twelve fish were collected at each of four different time points for a total of 48 fish. Total RNA was extracted from the liver of each fish. Equal amounts of RNA from three fish were pooled to create four pools of RNA per time point. Each RNA pool was hybridized to an array for a total of 16 arrays with four arrays per time point.

Repositories


GEO

GSE58670

ArrayExpress

E-GEOD-58670

BioProject

PRJNA253132

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