A free web service that allows to study short read data from small RNA-seq experiments. DARIO provides a wide range of analysis features, including quality control, read normalization, ncRNA quantification and prediction of putative ncRNA candidates. The expression data and ncRNA predictions can be downloaded in the standardized BED format. We provide a script to locally convert SAM files and other mapping files to the BED format. The script is optimized to greatly reduce the amount of data that has to be uploaded to the DARIO server.
Interdisciplinary Center for Bioinformatics and Bioinformatics Group, Department of Computer Science, University Leipzig, Leipzig, Germany; LIFE, Leipzig Research Center for Civilization Diseases, University Leipzig, Leipzig, Germany
DARIO funding source(s)
LIFE - Leipzig Research Center for Civilization Diseases, Universität Leipzig. European Social Fund and the Free State of Saxony