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DarkHorse HGT Candidate Resource

Gathers information about explore HGT patterns for individual genes, genomes, or groups of genomes. DarkHouse includes simple selection tools for individual organisms or groups of organisms, and searches can be made by genome name, annotation keywords, protein sequence or lineage probability index (LPI) score. The database contains about 1456 bacterial and archaeal genomes.

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DarkHorse HGT Candidate Resource classification

DarkHorse HGT Candidate Resource specifications

Restrictions to use:
Academic or non-commercial use
Data access:
File download, Browse
Maintained:
Yes
Community driven:
No
User data submission:
Not allowed

DarkHorse HGT Candidate Resource support

Documentation

Maintainer

  • Stella Podell <>

Additional information

http://darkhorse.ucsd.edu/tutorial.html

Credits

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Publications

Institution(s)

Marine Biology Research Division, Scripps Institution of Oceanography University of California at San Diego, La Jolla, CA, USA; Division of Biological Sciences, University of California at San Diego, La Jolla, CA, USA

Funding source(s)

Supported by the Gordon and Betty Moore Foundation, through a grant to CAMERA (Community Cyberinfrastructure for Advanced Marine Microbial Ecology Research and Analysis).

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.