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DARN specifications

Information


Unique identifier OMICS_16560
Name DARN
Interface Web user interface
Restrictions to use None
Computer skills Basic
Version 1.0
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Matthias Zytnicki <>

Information


Unique identifier OMICS_16560
Name DARN
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Version 1.0
Stability Stable
Requirements
GCC, G++, makedepend
Maintained Yes

Versioning


No version available

Documentation


Maintainer


  • person_outline Matthias Zytnicki <>

Publication for DARN

DARN citation

library_books

A widespread self cleaving ribozyme class is revealed by bioinformatics

2013
PMCID: 3867598
PMID: 24240507
DOI: 10.1038/nchembio.1386

[…] homology searches., in addition to previously described homology search strategies that were applied to all three permuted forms of twister ribozymes, we searched manually defined patterns using darn!. we sought homologs of twister in all sequences in refseq version 41, the “microbial” (bacterial and archaeal) subset of refseq version 44, the environmental sequences used previously, […]


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DARN institution(s)
INRA-BIA, Chemin de Borde-Rouge, Castanet, France

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