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|Alternative name||DAtabase of RNa Editing|
|Restrictions to use||None|
- Homo sapiens
Publication for DAtabase of RNa Editing
The 24th annual Nucleic Acids Research database issue: a look back and upcoming changes
[…] esses. Examples include SNP2TFBS, a database of SNPs in predicted transcription factor binding sites (TFBSs); LincSNP, a database that links SNPs to long noncoding RNAs and their TFBSs; LNCediting, a database of RNA editing in lncRNAs, and POSTAR, a resource on post-transcriptional regulation by RNA-binding proteins.Major protein sequence databases include updates from UniProt and InterPro, the la […]
Transposable Elements Are Major Contributors to the Origin, Diversification, and Regulation of Vertebrate Long Noncoding RNAs
[…] high frequency of Alu elements in transcribed regions of the human genome, which often occur in inverted pairs and thereby can form long RNA duplexes providing templates for ADARs .We used DARNED, a database of RNA editing sites in humans , to identify 2,941 A-to-I editing sites in mature lncRNA transcripts. As observed previously for mRNAs, most (82%) of the edited sites in lncRNAs occur within […]
Advances in Omics and Bioinformatics Tools for Systems Analyses of Plant Functions
[…] assigned to annotated Arabidopsis genes, and hyperlinks to external information resources such as The Arabidopsis Information Resource (TAIR). The RNA-editing site on protein 3D structure is a unique database of RNA-editing sites found in plant organelle genes with the results mapped onto amino acid sequences and 3D structures (). Fig. 3Literature mining for gene associations is also an essential […]
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