DART specifications


Unique identifier OMICS_20841
Alternative name Division based Alignment for RNA-Seq Transcripts
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A BWT-based index file and takes a read library (single-end or paired-end reads).
Input format FASTA, FASTQ
Output data Read alignments.
Output format SAM
Operating system Unix/Linux
Programming languages C++
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.1.2
Stability Stable
Maintained Yes



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  • person_outline Wen-Lian Hsu <>
  • person_outline Hsin-Nan Lin <>

Publication for Division based Alignment for RNA-Seq Transcripts

DART institution(s)
Institute of Information Science, Academia Sinica, Taipei, Taiwan
DART funding source(s)
Supported by Bioinformatics Core Facility for Translational Medicine and Biotechnology Development / MOST105-2319-B-400-002.

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