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DASH specifications

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Unique identifier OMICS_07490
Name DASH
Alternative name DASH Associates Shared Haplotypes
Software type Package/Module
Interface Command line interface
Restrictions to use None
Output data .clst Haplotype cluster file
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Version 1.1.0
Stability Stable
Maintained Yes

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Publication for DASH Associates Shared Haplotypes

DASH in publications

 (2)
PMCID: 3785105
PMID: 23615072
DOI: 10.1038/gene.2013.19

[…] matching with linear-time extension), a computationally efficient program for identifying shared identical-by-descent segments between pairs of individuals in a large population, and dash 1.1.0 (dash associates shared haplotypes), a program for clustering these segments into haplotype regions that are shared by multiple individuals., our analysis utilized default parameters, with a minimum […]

PMCID: 3342326
PMID: 22567117
DOI: 10.1371/journal.pone.0035897

[…] of ibd in cases of disease with respect to controls. two methods were recently proposed for the detection of ibd between multiple individuals: a markov chain monte carlo approach (mcmc) , and dash (dash associates shared haplotypes) , a graph-based algorithm which builds upon pairwise ibd segments to infer clusters of ibd individuals. a major limitation of mcmc is that it involves intense […]

DASH institution(s)
Department of Computer Science, Columbia University, New York, NY, USA

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