Main logo
?
tutorial arrow
×
Submit new tools
Share tools covering the current topic. Provide easy-to-follow guidelines to improve their usability.
Share new tools with the community
Sign up for free to promote the availability of bioinformatics tools

Data integration software tools | DNA methylation microarray data analysis

Cancer development and progression is driven by a complex pattern of genomic and epigenomic perturbations. Both types of perturbations can affect gene expression levels and disease outcome. Integrative analysis of cancer genomics data may therefore…
G T A T C G C T A
COHCAP
Desktop

COHCAP City of Hope CpG Island Analysis Pipeline

Provides tools for analysing single-nucleotide resolution methylation data.…

Provides tools for analysing single-nucleotide resolution methylation data. COHCAP is a pipeline that covers most user needs for differential methylation and integration with gene expression data.…

InCroMAP
Desktop

InCroMAP Integrated analysis of Cross-platform MicroArray and Pathway data

A tool for the analysis and visualization of high-level microarray data from…

A tool for the analysis and visualization of high-level microarray data from individual or multiple different platforms. Currently, InCroMAP supports mRNA, microRNA, DNA methylation and protein…

MultiDataSet
Desktop

MultiDataSet

Encapsulates multiple data sets. MultiDataSet is an R package designed to…

Encapsulates multiple data sets. MultiDataSet is an R package designed to manage data from different omics experiment in the same individuals. The software contains methods to perform typical…

G T A T C G C T A
PINCAGE
Desktop

PINCAGE Probabilistic INTegration of CAncer GEnomics data

Allows candidate biomarker identification and sample classification. PINCAGE is…

Allows candidate biomarker identification and sample classification. PINCAGE is a flexible model for integration of multiple gene-level genomic data types. It separately models the relationships…

Marmal-aid
Desktop
Web

Marmal-aid

A combined database and R package that allows you to investigate the…

A combined database and R package that allows you to investigate the methylation state of regions of interest across the genome. Marmal-aid is the largest publicly available Illumina…

Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.