Permits rigorous statistical investigation of genomic data. Genomic HyperBrowser can serve for a range of genomic investigations that query characteristics of individual tracks or relations between pairs of tracks along the genome. It is able to differentiate 15 types of tracks at the generic level. This tool furnishes programs for customizing data into forms that eases subsequent analyses.
Allows user-friendly data exploration, visualization and interpretation of allelic imbalance. MEA furnishes integrated allele-specific analysis of DNA methylation, histone modification and expression data. This software automates diploid pseudo genome reconstruction, allele-specific read detection and haplotype-resolved. It can be used without needing extensive bioinformatic expertise and be installed into a Docker container.
Memory efficient analysis of base resolution DNA methylation data in both the CpG and non-CpG sequence context. Integration of DNA methylation data derived from any methodology providing base- or low-resolution data.
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