There is an unmet need for a DNA methylation data simulator that can accurately reproduce a wide range of experimental setups, and can be routinely used to compare the performance of different statistical models. Source text: Rackham et al., 2015.

Desktop app
G T A T C G C T A DNemulator DNemulator

DNemulator

A package for simulating DNA sequencing errors, polymorphisms, cytosine…

A package for simulating DNA sequencing errors, polymorphisms, cytosine methylation and bisulfite conversion. DNemulator simulates polymorphisms based on real polymorphisms and their frequencies,…

Desktop app
G T A T C G C T A WGBSSuite WGBSSuite

WGBSSuite

A flexible stochastic simulation tool that generates single-base resolution DNA…

A flexible stochastic simulation tool that generates single-base resolution DNA methylation data genome-wide. Several simulator parameters can be derived directly from real datasets provided by the…

Desktop app
G T A T C G C T A Sherman Sherman

Sherman

A tool to simulate FastQ files for high-throughput sequencing experiments.

A tool to simulate FastQ files for high-throughput sequencing experiments.

Desktop app
G T A T C G C T A FastqToBS FastqToBS

FastqToBS

A simple and useful program (command line) to virtually treat with bisulfite a…

A simple and useful program (command line) to virtually treat with bisulfite a fastq file. Can be combined with existing NGS simulators to simulate BS-treated reads.

Desktop app
G T A T C G C T A BSSim BSSim

BSSim

Bisulfite sequencing simulator for next-generation sequencing.

Bisulfite sequencing simulator for next-generation sequencing.

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