×
Submit new tools
Share tools covering the current topic. Provide easy-to-follow guidelines to improve their usability.

Read simulation software tools | Bisulfite sequencing data analysis

There is an unmet need for a DNA methylation data simulator that can accurately reproduce a wide range of experimental setups, and can be routinely used to compare the performance of different statistical models.Source text:(Rackham et al., 2015)…
G T A T C G C T A
DNemulator
Desktop

DNemulator

A package for simulating DNA sequencing errors, polymorphisms, cytosine…

A package for simulating DNA sequencing errors, polymorphisms, cytosine methylation and bisulfite conversion. DNemulator simulates polymorphisms based on real polymorphisms and their frequencies,…

G T A T C G C T A
WGBSSuite
Desktop

WGBSSuite

A flexible stochastic simulation tool that generates single-base resolution DNA…

A flexible stochastic simulation tool that generates single-base resolution DNA methylation data genome-wide. Several simulator parameters can be derived directly from real datasets provided by the…

G T A T C G C T A
methInheritSim
Desktop

methInheritSim

Simulates whole-genome inherited bisulphite sequencing data. MethInheritSim…

Simulates whole-genome inherited bisulphite sequencing data. MethInheritSim simulates a multi-generation methylation case versus control experiment with inheritance relation using a real control…

G T A T C G C T A
Sherman
Desktop

Sherman

A tool to simulate FastQ files for high-throughput sequencing experiments.

A tool to simulate FastQ files for high-throughput sequencing experiments.

G T A T C G C T A
FastqToBS
Desktop

FastqToBS

A simple and useful program (command line) to virtually treat with bisulfite a…

A simple and useful program (command line) to virtually treat with bisulfite a fastq file. Can be combined with existing NGS simulators to simulate BS-treated reads.

G T A T C G C T A
BSSim
Desktop

BSSim

Bisulfite sequencing simulator for next-generation sequencing.

Bisulfite sequencing simulator for next-generation sequencing.

Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.