A total solution to deal with not only data dependent MS/MS but also data independent MS/MS experiments for metabolomics and lipidomics. Its feature is 1) implementing de-convolution method for data independent MS/MS 2) using unified criteria for peak identification 3) supporting all data processing step from raw data import to statistical analysis 4) user-friendly graphic user interface. MS-DIAL deals with data independent acquisition MS/MS data (ex. SWATH) by means of two step algorithms (peak spotting and MS2Dec) for spectral deconvolution. Also, it supports compound identification, peak alignment, and principal component analysis on the graphical user interface. The spectrum information is outputted by MassBank, NIST, and Mascot formats. And the organized data matrix (sample vs metabolite) is exported as tab delimited text file.
A web-based software that returns all theoretically possible phospholipids for a given m/z value and MS condition. VaLID links a search engine, a phospholipid DB and multiple visualization features for identification and dissemination of large-scale lipidomic datasets. Thus, a ‘best guess’ feature is given to focus on lipids predicted to be common based on the prevalence of the fatty acid chains.
Identifies lipids in Liquide Chromatography-Mass Spectometry (LC-MS)/MS-based lipidomics data. LIQUID provides users with the capability to process high throughput data and contains a customizable target library and scoring model per project needs. It provides visualization of multiple lines of spectral evidence for each lipid identification. This allows rapid examination of data for making confident identifications of lipid molecular species.
A data processing tool for the molecular characterization and quantification of lipid species from electrospray mass spectrometry data. LipidView™ Software enables lipid profiling by searching parent- and fragment-ion masses against a lipid fragment database containing over 25,000 entries and reports a numerical and graphical output for various lipid molecular species, lipid classes, fatty acids, and long chain bases. LipidView™ Software streamlines key steps such as automated data processing from template methods, method editing and selection, lipid species identification, comprehensive isotope contribution removal, multiple internal standards-based quantification, visualization and result reporting. Combined with the SCIEX QTRAP or TripleTOF Systems, this complete hardware and software package offers unique data acquisition strategies coupled with automated data processing for lipid profiling.
A high throughput lipid identification tool. SimLipid® accepts experimental MS and MS/MS data, enables lipids profiling by searching precursors against the known lipid structures and elucidates an unknown structure by matching experimental product ions against theoretical fragments of lipids from the database. It also supports LC-MS and LC-MS/ MS high throughput data processing methods providing a platform for further qualitative and quantitative data analysis.
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