Main logo
?
tutorial arrow
×
Submit new tools
Share tools covering the current topic. Provide easy-to-follow guidelines to improve their usability.
Share new tools with the community
Sign up for free to promote the availability of bioinformatics tools

Data visualization software tools | Genomic array data analysis

Array-based comparative genomic hybridization (CGH) technology is used to discover and validate genomic structural variation, including copy number variants, insertions, deletions and other structural variants (SVs). The visualization and…
VAMP
Desktop

VAMP

Visualization and Analysis of CGH arrays, transcriptome and other Molecular…

Visualization and Analysis of CGH arrays, transcriptome and other Molecular Profiles.

CGHweb
Web

CGHweb

A web-based tool that applies a number of popular algorithms to a single array…

A web-based tool that applies a number of popular algorithms to a single array CGH profile entered by the user. CGHweb generates a heatmap panel of the segmented profiles for each method as well as a…

aCGH-viewer
Web

aCGH-viewer

Assists oncologists in reviewing copy-number alterations in genomic profiles…

Assists oncologists in reviewing copy-number alterations in genomic profiles and identifying matched therapeutic orientations. aCGH-viewer is designed for use by clinicians and biologists and does…

SeeGH
Desktop

SeeGH

Analyzes and visualizes array CGH (Comparative genomic hybridization) data.…

Analyzes and visualizes array CGH (Comparative genomic hybridization) data. SeeGH allows users to handle its data in explorable karyotype diagrams and permits to detect specific patterns in a genome…

CGHPRO
Desktop

CGHPRO

Allows to analyze and visualize array comparative genomic hybridisation (CGH)…

Allows to analyze and visualize array comparative genomic hybridisation (CGH) data. CGHPRO is a standalone application that features the test of hybridization quality, normalization and…

SnoopCGH
Desktop

SnoopCGH

SnoopCGH is a java desktop application for visualising and exploring…

SnoopCGH is a java desktop application for visualising and exploring comparative genomic hybridization (CGH) data.

MD-SeeGH
Desktop

MD-SeeGH

A platform for the integrative analysis of diverse microarray data,…

A platform for the integrative analysis of diverse microarray data, facilitating multiple profile analyses and group comparisons.

SegAnnDB
Web

SegAnnDB

Improves previous visualization approaches by allowing the model to be…

Improves previous visualization approaches by allowing the model to be interactively updated using annotated regions. SegAnnDB is a Web-based computer vision system for DNA copy number profile…

FISH Oracle
Web

FISH Oracle

Offers a fast and easy to use visualization tool for array CGH and SNP array…

Offers a fast and easy to use visualization tool for array CGH and SNP array data. FISH Oracle allows for the identification of genomic regions representing minimal common changes based on data from…

Genovar
Desktop

Genovar

Detects copy number variation (CNV) regions and provides a visual inspection…

Detects copy number variation (CNV) regions and provides a visual inspection function to reduce false positive CNV calls based on comparative genomic hybridization arrays (aCGH) and next generation…

ISACGH
Desktop

ISACGH In Silico Array-CGH

Allows visualizing array CGH data or/and expression arrays onto human or mouse…

Allows visualizing array CGH data or/and expression arrays onto human or mouse chromosomal coordinates (automatically found through their standard identifiers) and represents the regions with copy…

arrayCyGHt
Web

arrayCyGHt

A web tool that analyzes single arrayCGH data.

A web tool that analyzes single arrayCGH data.

CGcgh
Desktop
CGH Explorer
Desktop

CGH Explorer

An easy-to-use software tool for analyzing two color copy number alteration…

An easy-to-use software tool for analyzing two color copy number alteration arrays from multiple platforms, including Agilent Technologies, Illumina, AffyMetrix, NimbleGen and others.

Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.