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- Database of Orthologous Promoters
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(Sebestyén et al., 2009)
DoOPSearch: a web-based tool for finding and analysing common conserved motifs in the promoter regions of different chordate and plant genes.
PMID: 19534755 DOI: 10.1186/1471-2105-10-S6-S6
(Barta et al., 2005)
DoOP: Databases of Orthologous Promoters, collections of clusters of orthologous upstream sequences from chordates and plants.
Nucleic Acids Res.
PMID: 15608291 DOI: 10.1093/nar/gki097
Comparative genomics-based orthologous promoter analysis using the DoOP database and the DoOPSearch web tool.
Methods Mol Biol.
Agricultural Research Institute of the Hungarian Academy of Sciences, Martonvásár, Hungary; Bioinformatics Group, Agricultural Biotechnology Center, Godollo, Hungary; Department of Molecular Biophysics (B020), German Cancer Research Center (DKFZ), Heidelberg, Germany; Apoptosis and Genomics Research Group of the Hungarian Academy of Sciences, Research Center for Molecular Medicine, Medical and Health Science Center, University of Debrecen, Debrecen, Hungary
Supported by grants from the Hungarian Scientific Research Fund (OTKA) (NK60352 and NK72730), the Hungarian Ministry of Agriculture and Rural Developmen R&D grant and the Bolyai Janos Scholarship.
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