dbOTU specifications

Information


Unique identifier OMICS_23332
Name dbOTU
Alternative names Distribution-based OTU calling, dbOTU3
Software type Application/Script
Interface Command line interface, Application programming interface
Restrictions to use None
Input data Some unaligned sequences, sequence count table.
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 1.5.0
Stability Stable
Requirements
Numpy, SciPy, BioPython, Pandas, Levenshtein
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainer


  • person_outline Scott Olesen

Additional information


https://github.com/swo/dbotu3 http://dbotu3.readthedocs.io/en/latest/

Publications for Distribution-based OTU calling

dbOTU institution(s)
Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA; Center for Microbiome Informatics and Therapeutics, Institute for Medical Engineering and Science, Cambridge, MA, USA

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