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A database of predicted and validated miRNA binding sites and correlated SNPs in human genome. dbSMR has a user-friendly interface where the information can be queried using either the gene name, microRNA name, polymorphism ID or transcript ID. Combination queries using ‘AND’ or ‘OR’ is also possible along with specifying the degree of change of intramolecular bonding with and without the polymorphism. Such a resource would enable researchers address questions like the role of regulatory SNPs in the 3′ UTRs and population specific regulatory modulations in the context of microRNA targets.

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G. N. Ramachandran Knowledge Center for Genome Informatics, Institute of Genomics and Integrative Biology (CSIR), Mall Road, Delhi, India

Funding source(s)

This work was supported by funding from Council of Scientific and Industrial Research (CSIR), India through project NWP0036 and Senior Research Fellowship by CSIR.

  • (Hariharan et al., 2009) dbSMR: a novel resource of genome-wide SNPs affecting microRNA mediated regulation. BMC bioinformatics.
    PMID: 19371411
  • Animals
    • Homo sapiens

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