DChIPRep specifications

Information


Unique identifier OMICS_13494
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data DChIPRep uses biological replicate information as well as chromatin Input data to allow for a rigorous assessment of differential enrichment.
Input format TXT, SAM
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python, R
License MIT License
Computer skills Advanced
Version 1.4.0
Stability Stable
Requirements HTSeq, Numpy, Argparse
Maintained Yes

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Maintainer


  • person_outline Bernd Klaus <>

DChIPRep article

DChIPRep institution(s)
Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany; Oncology iMed, CRUK-Cambridge Institute, Astra Zeneca, Cambridge, UK; Stanford Genome Technology Center, Stanford University, Palo Alto, CA, USA; Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA
DChIPRep funding source(s)
This work was supported by a PhD fellowship from Boerhinger Ingelheim Fonds; and the Deutsche Forschungsgemeinschaft (1422/3-1).

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