dcVar specifications

Information


Unique identifier OMICS_32842
Name dcVar
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes

Download


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Versioning


No version available

Maintainer


  • person_outline Brett McKinney

Additional information


A tutorial is available at: http://insilico.utulsa.edu/index.php/dcvar-tutorial/

Publication for dcVar

dcVar citation

library_books

dcVar: a method for identifying common variants that modulate differential correlation structures in gene expression data

2015
Front Genet
PMCID: 4609883
PMID: 26539209
DOI: 10.3389/fgene.2015.00312

[…] equired to validate these hypotheses. Nevertheless, the potential functional characterization of these variants and expression levels using available data demonstrates the added benefit of performing dcVar analysis alongside existing analyses. We note that other methods for computing genotype-specific differential correlation did not uncover the effects above ().Though we applied dcVar to an eQTL […]

dcVar institution(s)
Tandy School of Computer Science - Department of Mathematics, University of Tulsa, Tulsa, OK, USA; Arthritis and Clinical Immunology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA; Laureate Institute for Brain Research, Tulsa, OK, USA
dcVar funding source(s)
Supported by the Chapman Foundation and National Institutes of Health COBRE grants P30GM110766 and P20GM103456, and by the William K. Warren Foundation.

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