|Application:||DNA methylation array analysis, Gene expression microarray analysis|
|Number of samples:||15|
|Release date:||Jan 28 2008|
|Last update date:||Jan 18 2013|
|Genes:||STAT3, POU5F1, NANOG, SOX2|
|Taxon:||Homo sapiens, Mus musculus|
|Dataset link||Mapping Promoter CpG Methylation in mESCs|
We compared DNA methylation patterns in Wildtype (J1) and DNA methylation deficient (TKO) mouse ES cells. We performed 7 replicates using different passages of mouse ES cells. For gene expression analysis, we used the same cultures and performed 3 replicates. The supplied table is the average log ratio for the 3 replicates and takes into account the dye swap of replicate 2.