DDCSD specifications

Information


Unique identifier OMICS_20465
Name DDCSD
Alternative name Distributed Divide-and-Conquer-based Signature Discovery
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Advanced
Maintained No

Versioning


No version available

Maintainer


This tool is not maintained anymore.

Publication for Distributed Divide-and-Conquer-based Signature Discovery

DDCSD citation

library_books

HTSFinder: Powerful Pipeline of DNA Signature Discovery by Parallel and Distributed Computing

2016
Evol Bioinform Online
PMCID: 4750899
PMID: 26884678
DOI: 10.4137/EBO.S35545

[…] internal-memory-based unique signature discovery (PIMUS) is the improved version of IMUS. Both algorithms load the complete DNA database into the main memory to find unique signatures in EST datasets.Distributed divide-and-conquer-based signature discovery (DDCSD) applies a divide-and-conquer strategy for detecting DNA signatures. When the dataset is large and cannot be loaded into the memory all […]

DDCSD institution(s)
Department of Computer Science and Communication Engineering, Providence University, Taichung, Taiwan
DDCSD funding source(s)
Supported by the Ministry of Science and Technology of China, Taiwan, under Grants [NSC102-2218-E-040-001, NSC102-2221-E-040-004 and MOST103-2218-E-040-001] and [MOST103-2218-E-126-002].

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