DDNA specifications


Unique identifier OMICS_17034
Alternative name DDNA3
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Source code URL http://sparks-lab.org/pmwiki/download/index.php?Download=yueyang/ddna31-bin.tgz
Maintained No

Publication for DDNA


An all-atom knowledge-based energy function for protein-DNA threading, docking decoy discrimination, and prediction of transcription-factor binding profiles.

2009 Proteins
PMCID: 2743280
PMID: 19274740
DOI: 10.1002/prot.22384
DDNA institution(s)
Department of Polymer Science and Engineering, University of Science and Technology of China, Hefei, Anhui, China; Indiana University School of Informatics, Indiana University-Purdue University, Indianapolis, Indiana, USA; Center for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, Indiana, USA
DDNA funding source(s)
Supported by the NIH (GM066049 and GM085003), China Outstanding Youth Fund( No. 20525416), and China Scholarship Council.

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