DeadEasy caspase statistics

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DeadEasy caspase specifications

Information


Unique identifier OMICS_27809
Name DeadEasy caspase
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Stability Stable
Requirements
ImageJ
Maintained Yes

Taxon


  • Invertebrates
    • Drosophila melanogaster

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Versioning


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Maintainer


  • person_outline Alicia Hidalgo <>

Publication for DeadEasy caspase

DeadEasy caspase in publications

 (3)
PMCID: 5412559
PMID: 28373203
DOI: 10.1083/jcb.201607098

[…] a lethality phase at pupariation, indicating this is a critical time for myd88 function. using anti–death caspase 1 (dcp1), we counted all dying cells throughout the vnc of white pupae using adapted deadeasy caspase software (). in myd88kra56 homozygotes, apoptosis levels did not differ from controls, but they increased in myd88kra56/dfbsc279 trans-heterozygotes (). we generated a myd88-null […]

PMCID: 3641668
PMID: 23567253
DOI: 10.3791/50306

[…] antibodies. then install the plug-in in imagej, open a stack of confocal images and run plug-in. it counts glial cells automatically in about 30 seconds., automatic counting of apoptotic cells. "deadeasy caspase larvae" plug-in (www.biosciences-labs.bham.ac.uk/hidalgo/software.html) 18: this was developed to count the number of cells labeled with anti-cleaved-caspase3, and a new version […]

PMCID: 3166069
PMID: 21912512
DOI: 10.1371/journal.pbio.1001133

[…] might have on neuropile repair, we examined cell death levels. apoptotic cells were visualized with anti-cleaved-caspase3 antibodies, and counted in vivo automatically using purposely adapted deadeasy caspase software . injury increased the extent of apoptosis over non-injured controls (). expression of notchicd in glia did not rescue baseline apoptosis, but it rescued injury-induced […]


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DeadEasy caspase institution(s)
NeuroDevelopment Group, School of Biosciences, University of Birmingham, Birmingham, UK
DeadEasy caspase funding source(s)
Supported by Wellcome Trust Equipment Grant 073228 and EMBO YIP, and by BBSRC and MRC studentships.

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