DEAR-O specifications

Information


Unique identifier OMICS_12631
Name DEAR-O
Alternative name Differential Expression Analysis based on RNA-seq data – Online
Interface Web user interface
Restrictions to use None
Input data The user input options include choice of data source, choice of analysis tools and their versions, and choice of the number of biological replicates used in the analysis. All input fields are pull down selection lists.
Output data The output results from the DEAR-O platform include (i) a table to summarise the specificity and sensitivity for the query and subject sets; (ii) a ROC plot with two AUC values to show the comparative results between the query and subject sets; (iii) a table to show the number of DEGs from the query set, the subject set, and the gold standard set; and (iv) a Venn diagram to show the intersections of the number of DEGs identified by the query, subject and gold standard sets.
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Qiong-Yi Zhao <>

Publication for Differential Expression Analysis based on RNA-seq data – Online

DEAR-O institution(s)
The University of Queensland, Queensland Brain Institute, St Lucia, Queensland, Australia
DEAR-O funding source(s)
This work has been supported by the National Health and Medical Research Council (1078901).

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