DEBrowser specifications

Information


Unique identifier OMICS_20500
Name DEBrowser
Interface Application programming interface
Restrictions to use None
Input data A count data obtained from RNA-Seq or another high-throughput sequencing experiment in the form of matrix values.
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

Documentation


Maintainers


  • person_outline Manuel Garber <>
  • person_outline Alper Kucukural <>

Additional information


https://github.com/UMMS-Biocore/debrowser

Information


Unique identifier OMICS_20500
Name DEBrowser
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.4.5
Stability Stable
Requirements shiny, ggvis, jsonlite
Maintained Yes

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Versioning


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Documentation


Maintainers


  • person_outline Manuel Garber <>
  • person_outline Alper Kucukural <>

Additional information


https://github.com/UMMS-Biocore/debrowser

Publication for DEBrowser

DEBrowser institution(s)
Bioinformatics Core, University of Massachusetts Medical School, Worcester, MA, USA; Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA, USA; RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA, USA; Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA
DEBrowser funding source(s)
Supported by fund from the National Human Genome Research Institute NHGRI grant #U01 HG007910-01 and the National Center for Advancing Translational Sciences grant #UL1 TR001453-01.

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