DECIPHER statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool DECIPHER
info

Tool usage distribution map

This map represents all the scientific publications referring to DECIPHER per scientific context
info info

Associated diseases

This word cloud represents DECIPHER usage per disease context
info

Popular tool citations

chevron_left Chimera detection chevron_right
Want to access the full stats & trends on this tool?

Protocols

DECIPHER specifications

Information


Unique identifier OMICS_01114
Name DECIPHER
Alternative name Database Enabled Code for Ideal Probe Hybridization Employing R
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

DECIPHER citation

call_split

Exploring gastric bacterial community in young pigs

2017
PLoS One
PMCID: 5332105
PMID: 28249050
DOI: 10.1371/journal.pone.0173029
call_split See protocol

[…] ne (Maximum number of Ns: 0; Max forward primer distance: 0; Max reverse primer distance: 0; Minimum sequence length: 50), chimera checking was carried out using the tool ‘Find Chimeras’ in DECIPHER (Database Enabled Code for Ideal Probe Hybridization Employing R) []. Non-chimeric sequences were aligned by RDP Aligner and the sequence reads not covering the V6 region were eliminated. After quality […]


Want to access the full list of citations?

DECIPHER reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review DECIPHER