DeconSeq specifications

Information


Unique identifier OMICS_01418
Name DeconSeq
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


Add your version

DeconSeq article

DeconSeq citation

2015
PMCID: 4428251

[…] arising from the high levels of non-bacterial dna in the adenoid biopsies. we note there are a variety of stand-alone methods available to eliminate this type of non-bacterial signal, such as deconseq [12], kraken [11] and fastq screen (babraham bioinformatics, babraham institute, uk). however, by utilising parameters in qiime, we were able to achieve an efficient removal […]

DeconSeq institution(s)
Department of Computer Science, San Diego State University, San Diego, CA, USA

DeconSeq reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review DeconSeq

Related Tools