DeepPPI specifications
Information
| Unique identifier | OMICS_18602 |
|---|---|
| Name | DeepPPI |
| Alternative name | Deep neural networks for Protein-Protein Interactions |
| Software type | Framework/Library |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux |
| Programming languages | Python |
| Computer skills | Advanced |
| Stability | Stable |
| Requirements | numpy, scipy, HDF5, h5py, scikit-learn, theano, keras |
| Maintained | Yes |
Download
Versioning
Add your version
Maintainer
- person_outline Xiuquan Du <>
Open Desktop
Querry regarding feature extraction and model building
#1 opened on 2017-12-07 by SUMEET TIWARI • 0 answers
2017-12-07, 13:29
I am trying to use the tool but the problem i face is that things are bit complex as i m new to Deep learning methods. First thing i would like to know in the paper author have described the feature extraction method but it would be better if they have provided the script that used by them to extract the features of the sequences. 2. Authors would have made simple for other users if they have given a script where person can just give their own training set , test set and final predictions will come. All the people don't have here deeper knowledge of Deep learning.
DeepPPI article
DeepPPI: Boosting Prediction of Protein–Protein Interactions with Deep Neural Networks.
DeepPPI reviews
Be the first to review DeepPPI
