Deep Threshold Tool specifications
|Name||Deep Threshold Tool|
|Interface||Web user interface|
|Restrictions to use||None|
|Input data||An aligned file.|
|Output data||A table for each increment of the probability of error which shows the distribution of nucleotides at all columns at which at least one base can be considered an ‘‘error’’.|
This tool is not available anymore.
Publication for Deep Threshold Tool
2014 PLoS One
Deep Threshold Tool institution(s)
Hepatitis Virus Diversity Research Programme, Department of Internal Medicine, University of the Witwatersrand, Johannesburg, South Africa; Department of Medicine, Faculty of Medicine, University of Khartoum, Khartoum, Sudan; Institute of Medical Virology, National Reference Centre of Hepatitis B and D, Justus, Liebig-University of Giessen, Giessen, Germany
Deep Threshold Tool funding source(s)
Supported by the Deutsche Forschungsgemeinschaft (DFG; German Research Foundation) of the special African-German collaborative programme, "Africa Initiative", (Grant GL595/3-1), Faculty of Health Sciences, University of the Witwatersrand, post-doctoral funding from the University of the Witwatersrand (SPARC) and the National Research Foundation of South Africa (GUN #86215).
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