DeepCRISPR specifications

Information


Unique identifier OMICS_30490
Name DeepCRISPR
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License Apache License version 2.0
Computer skills Advanced
Stability Stable
Requirements
tensorflow, sonnet
Maintained Yes

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Maintainers


  • person_outline Qi Liu <>
  • person_outline De-Shuang Huang <>

Information


Unique identifier OMICS_30490
Name DeepCRISPR
Interface Web user interface
Restrictions to use None
Computer skills Basic
Maintained Yes

Maintainers


  • person_outline Qi Liu <>
  • person_outline De-Shuang Huang <>

Publication for DeepCRISPR

DeepCRISPR institution(s)
Department of Endocrinology & Metabolism, Shanghai Tenth People’s Hospital, Tongji University, Shanghai, China; Bioinformatics Department, School of Life Sciences and Technology, Tongji University, Shanghai, China; Machine Learning & Systems Biology Lab, School of Electronics and Information Engineering, Tongji University, Shanghai, China; R&D Information, Innovation Center China, AstraZeneca, Shanghai, China; School of Life Science and Technology, ShanghaiTech University, Shanghai, China; State Key Laboratory Cultivation Base and Key Laboratory of Vision Science, Ministry of Health and Zhejiang Provincial Key Laboratory of Ophthalmology and Optometry, School of Ophthalmology and Optometry, Eye Hospital, Wenzhou Medical University, Wenzhou, China
DeepCRISPR funding source(s)
Supported by the National Major Research and Innovation Program of China (grant number 2016YFC1303205, SQ2017YFSF090222), National Natural Science Foundation of China (grant number 61572361, 61732012, 61520106006), Shanghai Rising-Star Program (grant number 16QA1403900) and Shanghai Natural Science Foundation Program (grant number 17ZR1449400).

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