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DeepDive specifications

Information


Unique identifier OMICS_09842
Name DeepDive
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Parallelization MapReduce
Computer skills Advanced
Stability Stable
High performance computing Yes
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Russ B. Altman

Information


Unique identifier OMICS_09842
Name DeepDive
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Parallelization MapReduce
Computer skills Advanced
Stability Stable

Versioning


No version available

Maintainer


This tool is not maintained anymore.

Publication for DeepDive

DeepDive citations

 (2)
library_books

Incremental Knowledge Base Construction Using DeepDive

2015
PMCID: 4852149
PMID: 27144081
DOI: 10.14778/2809974.2809991

[…] that encompasses problems of extraction, cleaning, and integration. recent names used for this problem include dealing with dark data and knowledge base construction (kbc). in this work, we describe deepdive, a system that combines database and machine learning ideas to help develop kbc systems, and we present techniques to make the kbc process more efficient. we observe that the kbc process […]

library_books

A Machine Reading System for Assembling Synthetic Paleontological Databases

2014
PLoS One
PMCID: 4250071
PMID: 25436610
DOI: 10.1371/journal.pone.0113523

[…] of fact. as a result, coping with ambiguity is a key challenge in many areas of computer science –., to accommodate the inherent ambiguity of the scientific literature, pdd is built upon the deepdive machine reading infrastructure , which is designed to extract information in a way that achieves a deep level of contextual understanding. to do this, deepdive takes a radical approach: […]


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DeepDive institution(s)
Biomedical Informatics Training Program, Stanford University, Stanford, CA, USA; Computer Sciences Department, University of Wisconsin-Madison, Madison, WI, USA; Department of Computer Science, Stanford University, Stanford, CA, USA; Departments of Bioengineering, Genetics, and Medicine, Stanford University, Stanford, CA, USA

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