deFUME specifications


Unique identifier OMICS_32534
Name deFUME
Interface Web user interface
Restrictions to use None
Input data Some nucleotide sequences generated from next generation sequencing technologies.
Input format FASTA,AB1
Output data The sequencing reads, the assembled contigs, predicted ORFs, BLASTp hits and InterPro functional data.
Output format FASTA,CSV
Programming languages Javascript, Perl, PHP
Computer skills Basic
Version 1.0
Stability Stable
Maintained Yes



  • person_outline Eric van der Helm <>

Additional information

Publication for deFUME

deFUME institution(s)
Supported by the European Union Seventh Framework Programme-ITN [FP7/2012/317058]; Novozymes A/S; the European Union Seventh Framework Programme (FP7-KBBE-2013-7-singlestage) under grant agreement no. 613745, Promys and the Novo Nordisk Foundation.

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