DegPack statistics
DegPack specifications
Information
| Unique identifier | OMICS_04842 |
|---|---|
| Name | DegPack |
| Interface | Web user interface |
| Restrictions to use | None |
| Computer skills | Basic |
| Stability | Stable |
| Maintained | Yes |
Publication for DegPack
2014 Methods
PMID: 24981074
DegPack citation
library_books
Subtype specific CpG island shore methylation and mutation patterns in 30 breast cancer cell lines
2016
BMC Syst Biol
PMCID: 5259919
PMID: 28155687
DOI: 10.1186/s12918-016-0356-2
[…] performed to extract differentially expressed genes (deg)s. for the pair-wise gene expression comparison, linear model based limma was used, and for three class comparison, mutual information based degpack [] was used., normal breast control data were obtained from tcga data portal (measured by whole genome bisulfite sequencing (wgbs); id: tcga-a7-a0ce-11a-21d-a148-05) and from genome wide […]
DegPack institution(s)
Department of Computer Science and Engineering, Seoul National University, Seoul, Korea; Bioinformatics Institute, Seoul National University, Seoul, Korea; Department of Computer Science, School of Informatics and Computing, Indiana University, Bloomington, IN, USA
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